
I can certainly do the programming and calculation parts in Matlab, it's just a matter of being able to load in the data file, matching it to a curve or function, and find the various co-ordinates.
#Matlab 2018b figure find point license
If you have any questions or concerns, please direct them to License Nemati, “Does the "Artificial Intelligence Clinician" learn optimal treatment strategies for sepsis in intensive care?,” arXiv:1902.03271, February 2019. To cite this work, please cite the arXiv publication: The rest of the authors contributed to the post at point85 and were heavily involved in the critical analysis of the original work. Russell Jeter - AI Clinician Implementation - SwankyFrobenius.Obtaining raw MIMIC III data requires creating a PhysioNet Works account. The data that has been supplied is data from 5,366 septic patients in the MIMIC III dataset after normalization (though, we have included the raw MAP values to compare the AI Clinician recommendations to the patients' MAP values).

If you find this is not the case, please let us know. There should not be any additional packages that are needed to replicate our analysis.
#Matlab 2018b figure find point code
├── model_generation # Code to generate the AI Clinician models.Īll code was written and tested using MATLAB 2018a and MATLAB 2018b for OSX and Linux. ├── analysis # Code to perform our analysis of the models. ├── data # Normalized data and pre-generated models mat files for 500 models in the data directory to assist the readers with their own analysis.

This will generate the figure comparing the clinician and AI Clinician expected policy values and will begin generating the figures that show the recommendations the AI Clinician makes with individual patients.ĬAUTION: The main script can be quite computationally expensive. This will generate 500 models according to the methods in "The Artificial Intelligence Clinician learns optimal treatment strategies for sepsis in intensive care."Īfter generating the models (which will be stored in the data directory), navigate to the analysis directory and run the run_analysis.m script. To replicate our results, simply clone the repository, navigate to the model_generation directory, and run the main.m script. in their Nature Medicine article "The Artificial Intelligence Clinician learns optimal treatment strategies for sepsis in intensive care." This repository contains the MATLAB code used to recreate their AI clinician, and produce the individual patient dosing figures in that post.

In the post we attempt to recreate the AI Clinician detailed by Komorowski, et al.

This is the companion GitHub repository for the point85 blog post found here. Policy Iteration for Treating Sepsis Patients
